STRINGSTRING
XCC4040 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC4040" - Uncharacterized protein conserved in bacteria in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC4040Uncharacterized protein conserved in bacteria (605 aa)    
Predicted Functional Partners:
XCC3921
Peptidase; Predicted aminopeptidases (602 aa)
   
          0.686
XCC2867
Outer membrane receptor proteins mostly Fe transport (928 aa)
   
          0.667
folH
Predicted aminopeptidases (549 aa)
   
          0.665
XCC3157
Predicted aminopeptidases (375 aa)
   
          0.656
XCC3158
Predicted aminopeptidases (92 aa)
   
          0.625
XCC0024
Uncharacterized protein; Predicted aminopeptidases (594 aa)
   
          0.614
XCC3043
Ferric enterobactin receptor; Outer membrane receptor proteins mostly Fe transport (793 aa)
   
          0.596
XCC3045
Ferric enterobactin receptor; Outer membrane receptor proteins mostly Fe transport (795 aa)
   
          0.591
XCC3079
Ferric enterobactin receptor; Outer membrane receptor proteins mostly Fe transport (811 aa)
   
          0.590
tbp
Outer membrane receptor proteins, mostly Fe transport (871 aa)
   
          0.587
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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