STRINGSTRING
CAP53612.1 protein (Xanthomonas campestris campestris) - STRING interaction network
"CAP53612.1" - Rhs family protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP53612.1Rhs family protein (1850 aa)    
Predicted Functional Partners:
CAP53611.1
Rhs family protein (303 aa)
          0.921
engXCA
Major extracellular endoglucanase; Endoglucanase (484 aa)
     
 
  0.820
CAP51797.1
annotation not available (199 aa)
     
 
  0.820
XCC0684
Serine protease; Function unknown (552 aa)
     
 
  0.800
XCC0955
Peptidyl-Asp metalloendopeptidase; Metalloprotease, specifically cleaves on the N-terminal side of aspartyl, glutamyl and cysteic acid residues (417 aa)
 
 
 
  0.752
XCC0449
Lytic enzyme; RTX toxins and related Ca2+-binding proteins (576 aa)
 
          0.749
XCC3535
Cellulase; Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family (666 aa)
     
 
  0.729
XCC4186
Leucine-rich repeat (LRR) protein (610 aa)
 
     
  0.725
XCC3567
Uncharacterized protein conserved in bacteria (384 aa)
 
   
  0.714
XCC3802
Uncharacterized protein; Putative peptidoglycan-binding domain-containing protein (453 aa)
 
          0.670
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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