STRINGSTRING
XCC4048 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC4048" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC4048annotation not available (768 aa)    
Predicted Functional Partners:
CAP53620.1
FOG- Ankyrin repeat (311 aa)
 
          0.855
lpd2
Pyruvate/2-oxoglutarate dehydrogenase complex,dihydrolipoamide dehydrogenase (E3) component, and related enzymes (610 aa)
           
  0.704
CAP53621.1
FOG- Ankyrin repeat (312 aa)
 
          0.686
XCC4047
annotation not available (186 aa)
              0.655
ankB
Ankyrin-like protein; FOG- Ankyrin repeat (191 aa)
         
  0.611
avrXccC
Avirulence protein; Glucan-binding domain (YG repeat) (440 aa)
           
  0.587
XCC3409
Nisin-resistance protein; Periplasmic protease (456 aa)
   
          0.582
XCC4229
annotation not available (623 aa)
   
          0.514
xthA1
Exonuclease III (259 aa)
              0.470
XCC4045
Uncharacterized protein (153 aa)
              0.470
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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