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kdgR protein (Xanthomonas campestris campestris) - STRING interaction network
"kdgR" - Transcriptional regulator in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kdgRTranscriptional regulator (249 aa)    
Predicted Functional Partners:
XCC4070
L-fucose mutarotase; Plays a role in the catabolism of L-fucose. Involved in the anomeric conversion of L-fucose; Belongs to the RbsD / FucU family. FucU mutarotase subfamily (125 aa)
 
        0.797
fucP
Fucose permease (432 aa)
 
   
  0.658
XCC4074
Uncharacterized protein; Putative transcriptional regulator (797 aa)
         
  0.582
XCC4066
Uncharacterized protein; Predicted metal-dependent hydrolase of the TIM-barrel fold (290 aa)
 
   
  0.569
XCC4067
2-keto-3-deoxy-L-fuconate dehydrogenase; Plays a role in the catabolism of L-fucose. Catalyzes the NAD(+)-dependent oxidation of 2-keo-3-deoxy-L-fuconate to 2,4- diketo-3-deoxy-L-fuconate (256 aa)
 
   
  0.524
XCC1140
Uncharacterized protein conserved in bacteria (406 aa)
     
        0.512
pldA
Phospholipase; Outer membrane phospholipase A (376 aa)
     
        0.509
gacA
Transcriptional regulator luxR/uhpA family; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain (215 aa)
           
  0.502
engXCA
Major extracellular endoglucanase; Endoglucanase (484 aa)
           
  0.489
bgl6
Beta-glucosidase-related glycosidases (761 aa)
           
  0.487
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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