STRINGSTRING
mxaF2 protein (Xanthomonas campestris campestris) - STRING interaction network
"mxaF2" - Glucose dehydrogenase in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mxaF2Glucose dehydrogenase (575 aa)    
Predicted Functional Partners:
oma
Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (818 aa)
     
 
  0.678
bamD
Outer membrane protein assembly factor BamD; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (293 aa)
   
 
  0.654
XCC1742
annotation not available (172 aa)
     
 
  0.647
XCC0050
Outer membrane receptor proteins, mostly Fe transport (897 aa)
   
        0.630
XCC3476
Surface antigen protein (348 aa)
 
 
 
  0.609
avrBs2
Avirulence protein; Glycerophosphoryl diester phosphodiesterase,probable (718 aa)
 
          0.605
XCC2382
annotation not available (235 aa)
   
          0.598
pglA2
Endopolygalacturonase; Belongs to the glycosyl hydrolase 28 family (556 aa)
 
          0.588
XCC2360
Signal transduction histidine kinase (1364 aa)
 
     
  0.565
XCC2078
annotation not available (597 aa)
   
     
  0.543
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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