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XCC4108 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC4108" - Uncharacterized protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC4108Uncharacterized protein; Type II restriction enzyme, methylase subunits (368 aa)    
Predicted Functional Partners:
CAP53683.1
annotation not available (74 aa)
              0.845
uxuB
Mannitol-1-phosphate/altronate dehydrogenases (506 aa)
              0.845
bgl7
Glucan 1,4-beta-glucosidase; Beta-glucosidase-related glycosidases (896 aa)
              0.665
xylB6
Xylosidase/arabinosidase; Hydrolyzes 1,4-beta-D-xylans to remove successive D-xylose residues from the non-reducing termini; Belongs to the glycosyl hydrolase 43 family (568 aa)
              0.665
rspA
Starvation sensing protein; Enolase; Belongs to the mandelate racemase/muconate lactonizing enzyme family (419 aa)
              0.665
siaE2
Sialic acid-specific 9-O-acetylesterase; Sialate degradation; Belongs to the glycosyl hydrolase 2 family (654 aa)
              0.651
aguA
Xylan alpha-1,2-glucuronidase; Alpha-glucuronidase; Belongs to the glycosyl hydrolase 67 family (732 aa)
              0.651
birA
Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5’-adenylate (BirA-bio- 5’-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon (321 aa)
     
        0.631
XCC4101
Sal operon transcriptional repressor; Transcriptional regulators (406 aa)
              0.487
XCC0715
annotation not available (101 aa)
   
          0.422
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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