STRINGSTRING
XCC4111 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC4111" - Histone in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC4111Histone (260 aa)    
Predicted Functional Partners:
rimI
Acetyltransferases (160 aa)
           
  0.701
XCC4062
annotation not available (318 aa)
   
          0.619
XCC0300
annotation not available (225 aa)
   
          0.514
XCC4112
annotation not available (389 aa)
              0.499
mmsA
NAD-dependent aldehyde dehydrogenases (501 aa)
           
  0.489
hupB
Histone-like protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions (132 aa)
           
  0.487
hup
annotation not available (140 aa)
           
  0.487
XCC3656
annotation not available (86 aa)
   
          0.400
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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