STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uxaCGlucuronate isomerase (471 aa)    
Predicted Functional Partners:
uxuB
Mannitol-1-phosphate/altronate dehydrogenases
 
 0.993
gudP
Putative hexuronate transporter; Permeases of the major facilitator superfamily
 
  
 0.918
pglA1
Endopolygalacturonase; Belongs to the glycosyl hydrolase 28 family
    
 0.909
pglA2
Endopolygalacturonase; Belongs to the glycosyl hydrolase 28 family
    
 0.909
xylB5
Xylosidase; Hydrolyzes 1,4-beta-D-xylans to remove successive D-xylose residues from the non-reducing termini; Belongs to the glycosyl hydrolase 43 family
 
  
 0.885
xynB
annotation not available
 
  
 0.875
abfA
Alpha-L-arabinosidase; Alpha-L-arabinofuranosidase
  
  
 0.860
kduI
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate; Belongs to the KduI family
 
   
 0.822
xylB6
Xylosidase/arabinosidase; Hydrolyzes 1,4-beta-D-xylans to remove successive D-xylose residues from the non-reducing termini; Belongs to the glycosyl hydrolase 43 family
    
 0.817
xylB4
Xylosidase/arabinosidase; Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family
    
 0.809
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (11%) [HD]