STRINGSTRING
gudP protein (Xanthomonas campestris campestris) - STRING interaction network
"gudP" - Putative hexuronate transporter in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gudPPutative hexuronate transporter; Permeases of the major facilitator superfamily (501 aa)    
Predicted Functional Partners:
uxaC
Glucuronate isomerase (471 aa)
 
   
  0.918
xynA3
Beta-xylanase; Beta-1,4-xylanase (330 aa)
              0.898
XCC4120
Outer membrane receptor proteins mostly Fe transport (980 aa)
 
          0.595
XCC4070
L-fucose mutarotase; Plays a role in the catabolism of L-fucose. Involved in the anomeric conversion of L-fucose; Belongs to the RbsD / FucU family. FucU mutarotase subfamily (125 aa)
 
        0.586
garD
Altronate dehydratase (514 aa)
 
   
  0.562
bga1
Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family (964 aa)
 
          0.551
gfo
Glucose-fructose oxidoreductase; Predicted dehydrogenases and related proteins (369 aa)
   
 
      0.542
siaE2
Sialic acid-specific 9-O-acetylesterase; Sialate degradation; Belongs to the glycosyl hydrolase 2 family (654 aa)
   
          0.502
XCC2033
Oxidoreductase; Predicted dehydrogenases and related proteins (345 aa)
       
      0.489
fucP
Fucose permease (432 aa)
 
   
  0.484
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (15%) [HD]