STRINGSTRING
XCC4120 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC4120" - Outer membrane receptor proteins mostly Fe transport in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC4120Outer membrane receptor proteins mostly Fe transport (980 aa)    
Predicted Functional Partners:
XCC2826
annotation not available (343 aa)
   
          0.750
XCC2827
annotation not available (313 aa)
   
          0.749
XCC3965
annotation not available (337 aa)
   
          0.694
suxA
Outer membrane receptor proteins, mostly Fe transport (818 aa)
 
   
  0.684
xylP
Transport protein; Na+/melibiose symporter and related transporters (495 aa)
 
     
  0.682
XCC4237
Oar protein; Outer membrane receptor for ferrienterochelin and colicins (1006 aa)
   
   
  0.673
XCC2825
annotation not available (498 aa)
   
        0.672
XCC3964
annotation not available (280 aa)
   
          0.663
mopB
Outer membrane protein and related peptidoglycan-associated (lipo)proteins; Belongs to the ompA family (365 aa)
           
  0.639
XCC4222
Outer membrane receptor proteins mostly Fe transport (976 aa)
     
   
  0.614
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (14%) [HD]