STRINGSTRING
XCC4125 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC4125" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC4125annotation not available (72 aa)    
Predicted Functional Partners:
pcp
annotation not available (160 aa)
   
          0.577
XCC4126
annotation not available (190 aa)
              0.575
XCC3828
annotation not available (72 aa)
   
          0.534
XCC0163
Ca2+-binding protein (EF-Hand superfamily) (117 aa)
   
          0.516
XCC1498
annotation not available (328 aa)
   
          0.472
XCC2843
Uncharacterized protein (83 aa)
   
          0.466
XCC3383
annotation not available (114 aa)
   
          0.427
XCC0823
annotation not available (76 aa)
   
          0.417
XCC1488
annotation not available (303 aa)
   
          0.411
gumN
Uncharacterized protein conserved in bacteria (341 aa)
   
          0.410
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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