STRINGSTRING
XCC4131 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC4131" - OmpA-related protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC4131OmpA-related protein; Outer membrane receptor for ferrienterochelin and colicins (1011 aa)    
Predicted Functional Partners:
XCC3270
Oar protein; Outer membrane receptor proteins, mostly Fe transport (454 aa)
   
     
  0.785
XCC1750
Outer membrane receptor for monomeric catechols (911 aa)
     
   
  0.615
XCC2944
Outer membrane receptor proteins (878 aa)
   
   
  0.600
malE
ABC transporter sugar binding protein; ABC-type sugar transport system, periplasmic component (448 aa)
 
          0.581
rbsR
Transcriptional regulators (350 aa)
 
          0.575
XCC2665
Outer membrane receptor proteins mostly Fe transport (792 aa)
 
   
  0.573
XCC2203
Uncharacterized protein; Glucoamylase and related glycosyl hydrolases (1054 aa)
 
          0.572
XCC1892
Outer membrane receptor proteins mostly Fe transport (1033 aa)
   
   
  0.563
XCC2207
Uncharacterized protein conserved in bacteria (557 aa)
 
          0.525
XCC4133
annotation not available (506 aa)
 
          0.525
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (22%) [HD]