STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC4133annotation not available (506 aa)    
Predicted Functional Partners:
XCC2825
annotation not available
 
 
0.920
XCC3966
annotation not available
 
 
0.828
XCC2828
Outer membrane receptor proteins mostly Fe transport
 
     0.785
XCC2827
annotation not available
 
     0.783
XCC2826
annotation not available
 
    0.773
XCC3965
annotation not available
 
    0.770
XCC3964
annotation not available
  
     0.766
iroN
Outer membrane receptor proteins, mostly Fe transport
 
     0.765
XCC4132
OmpA-related protein; Outer membrane receptor for ferrienterochelin and colicins
 
     0.704
suxA
Outer membrane receptor proteins, mostly Fe transport
  
     0.701
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (13%) [HD]