STRINGSTRING
CAP53726.1 protein (Xanthomonas campestris campestris) - STRING interaction network
"CAP53726.1" - Transposase and inactivated derivatives in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP53726.1Transposase and inactivated derivatives (90 aa)    
Predicted Functional Partners:
CAP53729.1
annotation not available (218 aa)
              0.710
CAP53728.1
annotation not available (120 aa)
              0.710
CAP53727.1
annotation not available (104 aa)
              0.710
XCC3114
Degenerated ISxac3 transposase; Transposase and inactivated derivatives (272 aa)
 
        0.692
CAP53724.1
annotation not available (158 aa)
              0.674
tdk
Thymidine kinase; Unnamed protein product (209 aa)
              0.445
CAP53723.1
Transposase and inactivated derivatives (103 aa)
   
        0.442
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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