STRINGSTRING
XCC4146 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC4146" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC4146annotation not available (372 aa)    
Predicted Functional Partners:
opgD
Glucans biosynthesis protein D; Probably involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans (OPGs); Belongs to the OpgD/OpgG family (533 aa)
              0.755
XCC3972
annotation not available (195 aa)
   
          0.676
XCC2828
Outer membrane receptor proteins mostly Fe transport (1096 aa)
   
          0.633
CAP53735.1
annotation not available (146 aa)
              0.623
CAP53734.1
annotation not available (54 aa)
              0.623
XCC0588
annotation not available (111 aa)
   
          0.606
XCC4120
Outer membrane receptor proteins mostly Fe transport (980 aa)
   
          0.564
XCC4126
annotation not available (190 aa)
   
          0.553
XCC4179
annotation not available (371 aa)
   
          0.537
XCC2827
annotation not available (313 aa)
   
          0.537
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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