STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC4165annotation not available (489 aa)    
Predicted Functional Partners:
XCC4164
annotation not available
 
     0.977
folE
GTP cyclohydrolase 1; Unnamed protein product
       0.866
XCC4163
Uncharacterized protein conserved in bacteria
 
     0.857
XCC4168
annotation not available
 
     0.576
slyA
Transcriptional regulator for cryptic hemolysin; Transcriptional regulators
       0.562
ftsX
Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division
   
 
 0.556
oprN6
Outer membrane protein
  
    0.529
fusE
Fusaric acid resistance protein; Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
       0.519
XCC4171
Predicted membrane protein
       0.519
XCC3589
annotation not available
 
     0.450
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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