STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
folEGTP cyclohydrolase 1; Unnamed protein product (209 aa)    
Predicted Functional Partners:
ribA
GTP cyclohydrolase-2; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family
 
 
 
 0.972
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family
  
 
 0.962
ptps
6-pyruvoyl-tetrahydropterin synthase
  
 
 0.956
folK2
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; 78-dihydro-6-hydroxymethylpterin- pyrophosphokina se
  
 0.955
phoA
Alkaline phosphatase; Unnamed protein product; Belongs to the alkaline phosphatase family
     
 0.913
moaA
GTP 3',8-cyclase; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
  
 
 0.912
phoD1
Phosphodiesterase/alkaline phosphatase D
     
  0.900
phoD2
Uncharacterized protein; Phosphodiesterase/alkaline phosphatase D
     
  0.900
XCC4164
annotation not available
       0.866
XCC4165
annotation not available
       0.866
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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