STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kgtPDicarboxylate transport protein; Permeases of the major facilitator superfamily (453 aa)    
Predicted Functional Partners:
dctA1
C4-dicarboxylate transport protein; Responsible for the transport of dicarboxylates such as succinate, fumarate, and malate from the periplasm across the membrane
 
  
 0.766
dctA2
Proton glutamate symport protein; Na+/H+-dicarboxylate symporters; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family
  
  
 0.730
gabP
Amino acid transporter; Gamma-aminobutyrate permease and related permeases
  
 
 0.707
citH
Mg++ citrate complex transporter; H+/citrate symporter
  
  
 0.697
sulP
Sulfate permease and related transporters (MFS superfamily)
   
 
 0.655
mgtE1
Magnesium transporter MgtE; Acts as a magnesium transporter
  
   
 0.641
mgtE2
Magnesium transporter MgtE; Acts as a magnesium transporter
      
 0.609
gltA
Citrate synthase; Belongs to the citrate synthase family
  
   0.594
prpC
Citrate synthase; Belongs to the citrate synthase family
   
   0.534
egl1
Cellulase; Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family
      
 0.487
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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