STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP53777.1Predicted transcriptional regulators (89 aa)    
Predicted Functional Partners:
XCC1902
annotation not available
  
     0.603
XCC4188
annotation not available
       0.602
XCC3567
Uncharacterized protein conserved in bacteria
  
     0.600
XCC4206
annotation not available
  
     0.593
CAP53775.1
annotation not available
       0.561
CAP49830.1
Uncharacterized conserved protein
  
     0.517
CAP53779.1
Predicted endonuclease distantly related to archaeal Holliday junction resolvase and Mrr-like restriction enzymes
  
     0.482
virK
annotation not available
  
     0.441
fecA2
Outer membrane receptor proteins, mostly Fe transport
  
     0.440
XCC3535
Cellulase; Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family
  
     0.426
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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