STRINGSTRING
CAP53777.1 protein (Xanthomonas campestris campestris) - STRING interaction network
"CAP53777.1" - Predicted transcriptional regulators in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP53777.1Predicted transcriptional regulators (89 aa)    
Predicted Functional Partners:
XCC1902
annotation not available (333 aa)
   
          0.603
XCC4188
annotation not available (109 aa)
              0.602
XCC3567
Uncharacterized protein conserved in bacteria (384 aa)
   
          0.600
XCC4206
annotation not available (118 aa)
   
          0.593
CAP53775.1
annotation not available (70 aa)
              0.561
CAP49830.1
Uncharacterized conserved protein (265 aa)
   
          0.517
CAP53779.1
Predicted endonuclease distantly related to archaeal Holliday junction resolvase and Mrr-like restriction enzymes (278 aa)
   
          0.482
virK
annotation not available (143 aa)
   
          0.441
fecA2
Outer membrane receptor proteins, mostly Fe transport (890 aa)
   
          0.440
XCC3535
Cellulase; Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family (666 aa)
   
          0.426
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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