STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yrbDToluene tolerance protein; ABC-type transport system involved in resistance to organic solvents periplasmic component (180 aa)    
Predicted Functional Partners:
XCC4208
Toluene tolerance protein; ABC-type transport system involved in resistance to organic solvents permease component
 0.998
yrbC
Toluene tolerance protein; ABC-type transport system involved in resistance to organic solvents auxiliary component
 
 0.996
XCC4211
Predicted NTP binding protein (contains STAS domain)
  
 0.992
XCC4207
Toluene tolerance protein; ABC-type spermidine/putrescine transport systems, ATPase components
 0.991
vacJ
Surface lipoprotein
 
   
 0.979
XCC0635
ABC transporter permease; ABC-type transport system involved in resistance to organic solvents permease component
 
 0.941
XCC0634
ABC transporter ATP-binding protein; ABC-type transport system involved in resistance to organic solvents ATPase component
 
 0.881
XCC0633
Uncharacterized protein; ABC-type transport system involved in resistance to organic solvents, periplasmic component
     
  0.800
lolC
ABC-type transport system involved in lipoprotein release permease component
 
    0.589
lolA
Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
  
    0.586
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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