STRINGSTRING
XCC4218 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC4218" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC4218annotation not available (84 aa)    
Predicted Functional Partners:
tcmJ
annotation not available (113 aa)
   
          0.665
XCC4217
Transcriptional regulator (306 aa)
 
          0.657
XCC1097
annotation not available (209 aa)
   
          0.607
XCC2308
annotation not available (58 aa)
   
          0.498
XCC4023
annotation not available (249 aa)
   
          0.488
XCC1402
annotation not available (138 aa)
   
          0.459
XCC4216
Zinc-type alcohol dehydrogenase-like protein; NADPH-quinone reductase and related Zn-dependent oxidoreductases; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily (350 aa)
              0.455
XCC1994
annotation not available (192 aa)
   
          0.427
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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