STRINGSTRING
XCC4223 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC4223" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC4223annotation not available (129 aa)    
Predicted Functional Partners:
XCC1902
annotation not available (333 aa)
   
          0.611
CAP49938.1
annotation not available (438 aa)
   
          0.598
XCC2542
annotation not available (172 aa)
   
          0.574
XCC4224
Uncharacterized protein; FOG- GAF domain (582 aa)
              0.563
XCC0047
annotation not available (283 aa)
   
          0.553
XCC1138
annotation not available (351 aa)
   
          0.527
trbP
annotation not available (216 aa)
   
          0.520
XCC0955
Peptidyl-Asp metalloendopeptidase; Metalloprotease, specifically cleaves on the N-terminal side of aspartyl, glutamyl and cysteic acid residues (417 aa)
   
          0.505
CAP49378.1
Antirepressor regulating drug resistance,predicted signal transduction N-terminal membrane component (567 aa)
   
          0.484
mecI
Methicillin resistance protein; Predicted transcriptional regulator (128 aa)
   
          0.482
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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