STRINGSTRING
CAP53829.1 protein (Xanthomonas campestris campestris) - STRING interaction network
"CAP53829.1" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP53829.1annotation not available (37 aa)    
Predicted Functional Partners:
CAP53828.1
annotation not available (48 aa)
           
0.573
CAP53830.1
annotation not available (48 aa)
           
0.528
pilL
Chemotaxis protein histidine kinase and related kinases (2332 aa)
     
      0.515
cheA3
Chemotaxis protein histidine kinase and related kinases (551 aa)
     
      0.513
cheA2
Chemotaxis protein histidine kinase and related kinases (667 aa)
     
      0.513
fliS
Flagellar protein FliS; Unnamed protein product (137 aa)
       
      0.481
XCC4234
Glycerophosphoryl diester phosphodiesterase (392 aa)
           
0.457
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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