STRINGSTRING
phoC protein (Xanthomonas campestris campestris) - STRING interaction network
"phoC" - Acid phosphatase in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phoCAcid phosphatase; Membrane-associated phospholipid phosphatase (280 aa)    
Predicted Functional Partners:
sflA
NADH-dependent FMN reductase; Predicted flavoprotein (197 aa)
   
   
    0.923
ribE
Riboflavin synthase alpha chain (200 aa)
   
 
    0.905
ribF
Riboflavin biosynthesis protein; FAD synthase; Belongs to the ribF family (362 aa)
         
    0.900
appA
annotation not available (443 aa)
   
   
    0.861
XCC3903
Hydrolase; Predicted hydrolase (HAD superfamily) (243 aa)
     
 
    0.800
XCC4235
Outer membrane receptor proteins mostly Fe transport (783 aa)
 
        0.624
XCC3086
annotation not available (168 aa)
   
          0.530
XCC0546
annotation not available (270 aa)
   
   
  0.436
XCC0819
Integral membrane protein; Permeases of the drug/metabolite transporter (DMT) superfamily (309 aa)
 
      0.433
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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