Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABY93856.1 | ABY94477.1 | Teth39_0183 | Teth39_0820 | Hypothetical protein. | Peptidase U4, sporulation factor SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | 0.913 |
ABY93856.1 | ABY94480.1 | Teth39_0183 | Teth39_0823 | Hypothetical protein. | PFAM: PRC-barrel domain protein. | 0.809 |
ABY93856.1 | ABY94499.1 | Teth39_0183 | Teth39_0842 | Hypothetical protein. | Hypothetical protein; ATPase. Has a role at an early stage in the morphogenesis of the spore coat. | 0.855 |
ABY93856.1 | ABY94746.1 | Teth39_0183 | Teth39_1091 | Hypothetical protein. | Hypothetical protein. | 0.781 |
ABY93856.1 | ABY94747.1 | Teth39_0183 | Teth39_1092 | Hypothetical protein. | Hypothetical protein. | 0.800 |
ABY93856.1 | ABY94952.1 | Teth39_0183 | Teth39_1298 | Hypothetical protein. | PFAM: nucleoside recognition domain protein. | 0.786 |
ABY93856.1 | ABY95022.1 | Teth39_0183 | Teth39_1370 | Hypothetical protein. | PFAM: putative stage IV sporulation YqfD. | 0.798 |
ABY93856.1 | ABY95023.1 | Teth39_0183 | Teth39_1371 | Hypothetical protein. | PFAM: protein of unknown function DUF1429. | 0.659 |
ABY93856.1 | ABY95718.1 | Teth39_0183 | Teth39_2095 | Hypothetical protein. | Sporulation transcriptional regulator SpoIIID; TIGRFAM: regulatory protein, DeoR. | 0.873 |
ABY93856.1 | gpr | Teth39_0183 | Teth39_1402 | Hypothetical protein. | Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family. | 0.770 |
ABY94477.1 | ABY93856.1 | Teth39_0820 | Teth39_0183 | Peptidase U4, sporulation factor SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Hypothetical protein. | 0.913 |
ABY94477.1 | ABY94480.1 | Teth39_0820 | Teth39_0823 | Peptidase U4, sporulation factor SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | PFAM: PRC-barrel domain protein. | 0.871 |
ABY94477.1 | ABY94499.1 | Teth39_0820 | Teth39_0842 | Peptidase U4, sporulation factor SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Hypothetical protein; ATPase. Has a role at an early stage in the morphogenesis of the spore coat. | 0.835 |
ABY94477.1 | ABY94746.1 | Teth39_0820 | Teth39_1091 | Peptidase U4, sporulation factor SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Hypothetical protein. | 0.770 |
ABY94477.1 | ABY94747.1 | Teth39_0820 | Teth39_1092 | Peptidase U4, sporulation factor SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Hypothetical protein. | 0.783 |
ABY94477.1 | ABY94952.1 | Teth39_0820 | Teth39_1298 | Peptidase U4, sporulation factor SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | PFAM: nucleoside recognition domain protein. | 0.794 |
ABY94477.1 | ABY95022.1 | Teth39_0820 | Teth39_1370 | Peptidase U4, sporulation factor SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | PFAM: putative stage IV sporulation YqfD. | 0.794 |
ABY94477.1 | ABY95023.1 | Teth39_0820 | Teth39_1371 | Peptidase U4, sporulation factor SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | PFAM: protein of unknown function DUF1429. | 0.764 |
ABY94477.1 | ABY95718.1 | Teth39_0820 | Teth39_2095 | Peptidase U4, sporulation factor SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Sporulation transcriptional regulator SpoIIID; TIGRFAM: regulatory protein, DeoR. | 0.885 |
ABY94477.1 | gpr | Teth39_0820 | Teth39_1402 | Peptidase U4, sporulation factor SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family. | 0.752 |
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