STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3AEY7_SPAPN40S ribosomal protein rps16; Belongs to the universal ribosomal protein uS9 family. (142 aa)    
Predicted Functional Partners:
G3ADW5_SPAPN
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
  
 0.999
G3AE09_SPAPN
60S ribosomal protein L30.
  
 0.999
G3AE10_SPAPN
Uncharacterized protein.
   
 0.999
G3AEK1_SPAPN
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
  
 0.999
G3AEY8_SPAPN
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
 0.999
G3AF63_SPAPN
Ribosomal protein L26A.
  
 0.999
G3AF76_SPAPN
Ribosomal_L16 domain-containing protein.
  
 0.999
G3AFY6_SPAPN
Ribosomal protein L37; Binds to the 23S rRNA.
  
 0.999
G3AG99_SPAPN
Ribosomal protein L34.
  
 0.999
G3AGI6_SPAPN
60S large subunit ribosomal protein.
  
 0.999
Your Current Organism:
Spathaspora passalidarum
NCBI taxonomy Id: 619300
Other names: S. passalidarum NRRL Y-27907, Spathaspora passalidarum NRRL Y-27907
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