STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DUR3Urea active transport protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (716 aa)    
Predicted Functional Partners:
G3AS78_SPAPN
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
  
  
 0.707
TRP5
Tryptophan synthase.
     
 0.668
G3ATJ2_SPAPN
N-acetyltransferase domain-containing protein; In the N-terminal section; belongs to the acetylglutamate kinase family.
  
  
 0.668
G3AFR5_SPAPN
Urea amidolyase.
  
  
 0.665
NCS6
Cytoplasmic tRNA 2-thiolation protein 1; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position. Prior mcm(5) tRNA modification by the elongator complex is required for 2-thiolation. May also be involved in protein urmylation.
  
  
 0.576
OYE32
NADH-dependent flavin oxidoreductase.
      
 0.530
QOR2
Putative quinone oxidoreductase.
      
 0.530
G3AMS6_SPAPN
Pribosyltran domain-containing protein.
   
  
 0.506
G3AHZ8_SPAPN
Citrate synthase; Belongs to the citrate synthase family.
   
  
 0.500
G3ARV2_SPAPN
Uncharacterized protein.
   
    0.440
Your Current Organism:
Spathaspora passalidarum
NCBI taxonomy Id: 619300
Other names: S. passalidarum NRRL Y-27907, Spathaspora passalidarum NRRL Y-27907
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.