STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3AKF8_SPAPNPolyol dehydrogenase. (361 aa)    
Predicted Functional Partners:
G3AHP5_SPAPN
Sorbitol dehydrogenase.
  
  
 
0.905
TRP5
Tryptophan synthase.
     
 0.601
XKS1
D-xylulokinase.
  
 
 0.585
HEM1
5-aminolevulinate synthase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.541
G3AJM1_SPAPN
Aminotran_1_2 domain-containing protein.
  
 
 0.541
G3AP88_SPAPN
Serine palmitoyltransferase 2.
  
 
 0.541
COQ2
4-hydroxybenzoate polyprenyltransferase, mitochondrial; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate.
  
 
 0.500
G3AIH2_SPAPN
1-phenyl-1, 2-ethanediol dehydrogenase.
 
0.477
G3AIW7_SPAPN
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
   
 
 0.466
ADH1
Alcohol dehydrogenase 1.
 
 0.464
Your Current Organism:
Spathaspora passalidarum
NCBI taxonomy Id: 619300
Other names: S. passalidarum NRRL Y-27907, Spathaspora passalidarum NRRL Y-27907
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