STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR82715.1O-Antigen ligase. (447 aa)    
Predicted Functional Partners:
SIP95485.1
Sugar transferase, PEP-CTERM system associated/exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.793
SIR55341.1
Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase.
  
  
 0.712
SIR84355.1
Undecaprenyl-phosphate galactose phosphotransferase.
  
  
 0.712
SIR82689.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
       0.675
SIR45498.1
Acetyltransferase involved in cellulose biosynthesis, CelD/BcsL family.
 
     0.633
SIP95533.1
Polysaccharide export outer membrane protein.
 
  
 0.608
SIR57981.1
Glycosyltransferase involved in cell wall bisynthesis.
 
  
 0.608
SIQ46369.1
Glycosyltransferase like family 2.
 
   
 0.606
SIR82638.1
Hypothetical protein.
       0.580
SIR82665.1
PAS domain S-box-containing protein.
       0.580
Your Current Organism:
Sphaerotilus natans
NCBI taxonomy Id: 34103
Other names: ATCC 13338, Cladothrix dichotoma, DSM 6575, LMG 7172, LMG:7172, S. natans, Sphaerotilus dichotomus, Sphaerotilus fluitans, Streptothrix fluitans
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