STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH26741.1NADPH-dependent FMN reductase. (224 aa)    
Predicted Functional Partners:
SFG50664.1
Putative serine protein kinase, PrkA.
   
    0.499
SFG64185.1
LysM domain-containing protein.
   
  
 0.496
SFH21109.1
Nucleoid-associated protein YgaU, contains BON and LysM domains.
   
  
 0.496
SFG24173.1
Hypothetical protein.
  
 
  0.484
SFH09429.1
Nitroreductase.
 
   
 0.451
SFG70621.1
NAD(P)H dehydrogenase (quinone).
    
 0.426
SFH26787.1
SagB-type dehydrogenase domain-containing protein.
 
   
 0.425
SFG78852.1
Nitroreductase.
 
   
 0.421
SFH17844.1
4Fe-4S binding domain-containing protein.
  
     0.409
SFH26755.1
Short chain dehydrogenase.
       0.407
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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