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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
motAmotA1: flagellar motor stator protein MotA. (286 aa)    
Predicted Functional Partners:
motB
Motility protein B.
 
 0.999
motB_4
Membrane MotB of proton-channel complex MotA/MotB family protein.
 
 0.997
flgH_1
Flagellar L-ring family protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
  
 0.960
fliF
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.959
flgA
flgA_cterm: flagella basal body P-ring formation protein FlgA.
 
  
 0.956
cph2_1
GGDEF: diguanylate cyclase domain protein.
  
  
 0.950
flgD
Hypothetical protein; Required for flagellar hook formation. May act as a scaffolding protein.
 
  
 0.948
flgF-2
flgF: flagellar basal-body rod protein FlgF.
 
  
 0.943
cheA
Chemotaxis protein CheA.
  
  
 0.938
fliM
fliM_switch: flagellar motor switch protein FliM.
 
 
 0.938
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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