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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
camAPyridine nucleotide-disulfide oxidoreductase family protein. (415 aa)    
Predicted Functional Partners:
andAb_1
Rieske [2Fe-2S] domain protein.
 
 0.991
andAb_2
Rieske [2Fe-2S] domain protein.
 
 0.869
narB_1
Molybdopterin oxidoreductase family protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 0.860
nirD-2
nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit.
 0.836
DM82_5078
glyoxalase/Bleomycin resistance /Dioxygenase superfamily protein.
 
     0.831
nirD
nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit.
  
 0.759
aldA
Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family.
  
  
 0.739
DM82_2069
Rieske [2Fe-2S] domain protein.
  
 0.722
fabG_12
Short chain dehydrogenase family protein.
 
    0.722
naiP_4
Sugar (and other) transporter family protein.
 
     0.718
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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