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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mfpsA_2Glycosyl transferases group 1 family protein. (363 aa)    
Predicted Functional Partners:
pimA_2
Glycosyl transferases group 1 family protein.
 
     0.687
rfaQ_1
Glycosyltransferase 9 family protein.
 
  
 0.669
msbA
Lipid A export permease/ATP-binding protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
  
 0.665
DM82_549
Glycosyl transferase 2 family protein.
 
  
 0.660
treZ
Carbohydrate-binding module 48 family protein; Belongs to the glycosyl hydrolase 13 family.
   
 0.651
dnaE-2
Polc: DNA polymerase III, alpha subunit.
 
     0.637
DM82_2329
Polysaccharide biosynthesis family protein.
 
  
 0.617
proQ
proQ/FINO family protein.
  
     0.575
wcaJ_2
wcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase.
  
  
 0.518
wcaJ_3
wcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase.
  
  
 0.518
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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