STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNA2_0667Pyridoxal phosphate-dependent aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (463 aa)    
Predicted Functional Partners:
mfnA
L-tyrosine decarboxylase; Catalyzes the decarboxylation of L-aspartate to produce beta- alanine; Belongs to the group II decarboxylase family. MfnA subfamily.
  
 0.931
PNA2_0056
Hypothetical protein.
     
  0.900
PNA2_0666
Hypothetical protein.
 
     0.740
aspS
aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp).
 
   
 0.627
PNA2_1420
Amino acid carrier protein.
     
 0.564
PNA2_0672
Dipeptide ABC transporter, dipeptide-binding protein.
     
 0.557
PNA2_0671
D-aminoacylase (aspartate, glutamate ETC).
      
 0.550
PNA2_0669
Beta-lactamase-like protein.
      
 0.521
PNA2_1885
Serine--glyoxylate aminotransferase.
  
 
 0.429
Your Current Organism:
Pyrococcus sp. NA2
NCBI taxonomy Id: 342949
Other names: P. sp. NA2
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