Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
PNA2_0353 | PNA2_0553 | Ferredoxin. | Aldehyde:ferredoxin oxidoreductase. | 0.546 |
PNA2_0353 | PNA2_1543 | Ferredoxin. | Tungsten-containing aldehyde ferredoxin oxidoreductase. | 0.546 |
PNA2_0353 | PNA2_1850 | Ferredoxin. | Formaldehyde:ferredoxin oxidoreductase. | 0.546 |
PNA2_0553 | PNA2_0353 | Aldehyde:ferredoxin oxidoreductase. | Ferredoxin. | 0.546 |
PNA2_0553 | PNA2_1140 | Aldehyde:ferredoxin oxidoreductase. | Hypothetical protein. | 0.900 |
PNA2_0553 | PNA2_1542 | Aldehyde:ferredoxin oxidoreductase. | Molybdopterin converting factor related, subunit 1. | 0.628 |
PNA2_0553 | PNA2_1543 | Aldehyde:ferredoxin oxidoreductase. | Tungsten-containing aldehyde ferredoxin oxidoreductase. | 0.912 |
PNA2_0553 | PNA2_1850 | Aldehyde:ferredoxin oxidoreductase. | Formaldehyde:ferredoxin oxidoreductase. | 0.914 |
PNA2_1140 | PNA2_0553 | Hypothetical protein. | Aldehyde:ferredoxin oxidoreductase. | 0.900 |
PNA2_1140 | PNA2_1543 | Hypothetical protein. | Tungsten-containing aldehyde ferredoxin oxidoreductase. | 0.900 |
PNA2_1140 | PNA2_1850 | Hypothetical protein. | Formaldehyde:ferredoxin oxidoreductase. | 0.900 |
PNA2_1539 | PNA2_1541 | Hypothetical protein. | Cofactor modifying protein. | 0.786 |
PNA2_1539 | PNA2_1542 | Hypothetical protein. | Molybdopterin converting factor related, subunit 1. | 0.780 |
PNA2_1539 | PNA2_1543 | Hypothetical protein. | Tungsten-containing aldehyde ferredoxin oxidoreductase. | 0.671 |
PNA2_1539 | PNA2_1544 | Hypothetical protein. | Hypothetical protein. | 0.568 |
PNA2_1541 | PNA2_1539 | Cofactor modifying protein. | Hypothetical protein. | 0.786 |
PNA2_1541 | PNA2_1542 | Cofactor modifying protein. | Molybdopterin converting factor related, subunit 1. | 0.838 |
PNA2_1541 | PNA2_1543 | Cofactor modifying protein. | Tungsten-containing aldehyde ferredoxin oxidoreductase. | 0.819 |
PNA2_1541 | PNA2_1544 | Cofactor modifying protein. | Hypothetical protein. | 0.490 |
PNA2_1542 | PNA2_0553 | Molybdopterin converting factor related, subunit 1. | Aldehyde:ferredoxin oxidoreductase. | 0.628 |
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