Mo01078 protein (Mixia osmundae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

Mo01078

Uncharacterized protein. (398 aa)

Predicted Functional Partners:

Mo06085

0.997

Mo05763

0.983

Mo01142

0.977

Mo05840

0.976

Mo02018

0.974

Mo02998

0.953

Mo02956

0.918

Mo00012

0.862

Mo05492

0.831

Mo00109

0.811

Your Current Organism:

Mixia osmundae

NCBI taxonomy Id: 764103
Other names: M. osmundae IAM 14324, Mixia osmundae IAM 14324

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Mo00012	Mo00109	G7DS12	G7DSA8	zf-Tim10_DDP domain-containing protein.	Uncharacterized protein.	0.882
Mo00012	Mo01078	G7DS12	G7DV16	zf-Tim10_DDP domain-containing protein.	Uncharacterized protein.	0.862
Mo00012	Mo02018	G7DS12	G7DXQ1	zf-Tim10_DDP domain-containing protein.	Uncharacterized protein.	0.544
Mo00012	Mo02956	G7DS12	G7E0D0	zf-Tim10_DDP domain-containing protein.	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	0.655
Mo00012	Mo05492	G7DS12	G7E7J4	zf-Tim10_DDP domain-containing protein.	zf-Tim10_DDP domain-containing protein; Belongs to the small Tim family.	0.991
Mo00012	Mo05763	G7DS12	G7E8B4	zf-Tim10_DDP domain-containing protein.	Uncharacterized protein.	0.617
Mo00012	Mo05840	G7DS12	G7E8I9	zf-Tim10_DDP domain-containing protein.	Uncharacterized protein.	0.430
Mo00012	Mo06085	G7DS12	G7E9R9	zf-Tim10_DDP domain-containing protein.	Uncharacterized protein.	0.703
Mo00109	Mo00012	G7DSA8	G7DS12	Uncharacterized protein.	zf-Tim10_DDP domain-containing protein.	0.882
Mo00109	Mo01078	G7DSA8	G7DV16	Uncharacterized protein.	Uncharacterized protein.	0.811
Mo00109	Mo02018	G7DSA8	G7DXQ1	Uncharacterized protein.	Uncharacterized protein.	0.640
Mo00109	Mo02956	G7DSA8	G7E0D0	Uncharacterized protein.	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	0.989
Mo00109	Mo02998	G7DSA8	G7E0H2	Uncharacterized protein.	Uncharacterized protein.	0.414
Mo00109	Mo05492	G7DSA8	G7E7J4	Uncharacterized protein.	zf-Tim10_DDP domain-containing protein; Belongs to the small Tim family.	0.888
Mo00109	Mo05763	G7DSA8	G7E8B4	Uncharacterized protein.	Uncharacterized protein.	0.637
Mo00109	Mo06085	G7DSA8	G7E9R9	Uncharacterized protein.	Uncharacterized protein.	0.866
Mo01078	Mo00012	G7DV16	G7DS12	Uncharacterized protein.	zf-Tim10_DDP domain-containing protein.	0.862
Mo01078	Mo00109	G7DV16	G7DSA8	Uncharacterized protein.	Uncharacterized protein.	0.811
Mo01078	Mo01142	G7DV16	G7DV80	Uncharacterized protein.	Bac_surface_Ag domain-containing protein.	0.977
Mo01078	Mo02018	G7DV16	G7DXQ1	Uncharacterized protein.	Uncharacterized protein.	0.974