node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HrpB | RhlE_1 | PM8797T_12603 | PM8797T_16902 | COG1643 HrpA-like helicases. | COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | 0.885 |
HrpB | rpsD | PM8797T_12603 | PM8797T_19607 | COG1643 HrpA-like helicases. | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.953 |
NudF | RhlE_1 | PM8797T_24286 | PM8797T_16902 | MutT-like protein; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes. | COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | 0.830 |
NudF | nnrE | PM8797T_24286 | PM8797T_09589 | MutT-like protein; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes. | Hypothetical protein; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family. | 0.979 |
RhlE_1 | HrpB | PM8797T_16902 | PM8797T_12603 | COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | COG1643 HrpA-like helicases. | 0.885 |
RhlE_1 | NudF | PM8797T_16902 | PM8797T_24286 | COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | MutT-like protein; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes. | 0.830 |
RhlE_1 | nnrE | PM8797T_16902 | PM8797T_09589 | COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | Hypothetical protein; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family. | 0.932 |
RhlE_1 | pnp | PM8797T_16902 | PM8797T_27120 | COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | Polynucleotide phosphorylase/polyadenylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.910 |
RhlE_1 | rplC | PM8797T_16902 | PM8797T_12198 | COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.917 |
RhlE_1 | rplM | PM8797T_16902 | PM8797T_04910 | COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.892 |
RhlE_1 | rplN | PM8797T_16902 | PM8797T_12248 | COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | 50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.820 |
RhlE_1 | rplO | PM8797T_16902 | PM8797T_12283 | COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.870 |
RhlE_1 | rplX | PM8797T_16902 | PM8797T_12253 | COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | Probable 50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. | 0.912 |
RhlE_1 | rpsD | PM8797T_16902 | PM8797T_19607 | COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.838 |
nnrE | NudF | PM8797T_09589 | PM8797T_24286 | Hypothetical protein; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family. | MutT-like protein; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes. | 0.979 |
nnrE | RhlE_1 | PM8797T_09589 | PM8797T_16902 | Hypothetical protein; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family. | COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | 0.932 |
pnp | RhlE_1 | PM8797T_27120 | PM8797T_16902 | Polynucleotide phosphorylase/polyadenylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | 0.910 |
pnp | rplC | PM8797T_27120 | PM8797T_12198 | Polynucleotide phosphorylase/polyadenylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.886 |
pnp | rplM | PM8797T_27120 | PM8797T_04910 | Polynucleotide phosphorylase/polyadenylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.510 |
pnp | rplN | PM8797T_27120 | PM8797T_12248 | Polynucleotide phosphorylase/polyadenylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.584 |