Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDL56091.1 | OdhI | PM8797T_01354 | PM8797T_06120 | COG0631 Serine/threonine protein phosphatase. | Hypothetical protein; COG1716 FOG: FHA domain. | 0.440 |
EDL56091.1 | PrkC_13 | PM8797T_01354 | PM8797T_31810 | COG0631 Serine/threonine protein phosphatase. | Probable serine/threonine-protein kinase pknB; COG0515 Serine/threonine protein kinase. | 0.811 |
EmbR | PrkC_13 | PM8797T_17949 | PM8797T_31810 | Hypothetical protein; COG1716 FOG: FHA domain. | Probable serine/threonine-protein kinase pknB; COG0515 Serine/threonine protein kinase. | 0.460 |
GarA_2 | PrkC_13 | PM8797T_14721 | PM8797T_31810 | COG1716 FOG: FHA domain. | Probable serine/threonine-protein kinase pknB; COG0515 Serine/threonine protein kinase. | 0.511 |
GarA_2 | Stp | PM8797T_14721 | PM8797T_18149 | COG1716 FOG: FHA domain. | COG0631 Serine/threonine protein phosphatase. | 0.466 |
GluP | PrkC_13 | PM8797T_31820 | PM8797T_31810 | COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid). | Probable serine/threonine-protein kinase pknB; COG0515 Serine/threonine protein kinase. | 0.494 |
GluP | SigD_1 | PM8797T_31820 | PM8797T_31815 | COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid). | Probable RNA polymerase sigma-E factor; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. | 0.563 |
OdhI | EDL56091.1 | PM8797T_06120 | PM8797T_01354 | Hypothetical protein; COG1716 FOG: FHA domain. | COG0631 Serine/threonine protein phosphatase. | 0.440 |
OdhI | PrkC_13 | PM8797T_06120 | PM8797T_31810 | Hypothetical protein; COG1716 FOG: FHA domain. | Probable serine/threonine-protein kinase pknB; COG0515 Serine/threonine protein kinase. | 0.627 |
OdhI | Stp | PM8797T_06120 | PM8797T_18149 | Hypothetical protein; COG1716 FOG: FHA domain. | COG0631 Serine/threonine protein phosphatase. | 0.448 |
PrkC_13 | EDL56091.1 | PM8797T_31810 | PM8797T_01354 | Probable serine/threonine-protein kinase pknB; COG0515 Serine/threonine protein kinase. | COG0631 Serine/threonine protein phosphatase. | 0.811 |
PrkC_13 | EmbR | PM8797T_31810 | PM8797T_17949 | Probable serine/threonine-protein kinase pknB; COG0515 Serine/threonine protein kinase. | Hypothetical protein; COG1716 FOG: FHA domain. | 0.460 |
PrkC_13 | GarA_2 | PM8797T_31810 | PM8797T_14721 | Probable serine/threonine-protein kinase pknB; COG0515 Serine/threonine protein kinase. | COG1716 FOG: FHA domain. | 0.511 |
PrkC_13 | GluP | PM8797T_31810 | PM8797T_31820 | Probable serine/threonine-protein kinase pknB; COG0515 Serine/threonine protein kinase. | COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid). | 0.494 |
PrkC_13 | OdhI | PM8797T_31810 | PM8797T_06120 | Probable serine/threonine-protein kinase pknB; COG0515 Serine/threonine protein kinase. | Hypothetical protein; COG1716 FOG: FHA domain. | 0.627 |
PrkC_13 | SigD_1 | PM8797T_31810 | PM8797T_31815 | Probable serine/threonine-protein kinase pknB; COG0515 Serine/threonine protein kinase. | Probable RNA polymerase sigma-E factor; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. | 0.688 |
PrkC_13 | Stp | PM8797T_31810 | PM8797T_18149 | Probable serine/threonine-protein kinase pknB; COG0515 Serine/threonine protein kinase. | COG0631 Serine/threonine protein phosphatase. | 0.811 |
SigD_1 | GluP | PM8797T_31815 | PM8797T_31820 | Probable RNA polymerase sigma-E factor; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. | COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid). | 0.563 |
SigD_1 | PrkC_13 | PM8797T_31815 | PM8797T_31810 | Probable RNA polymerase sigma-E factor; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. | Probable serine/threonine-protein kinase pknB; COG0515 Serine/threonine protein kinase. | 0.688 |
Stp | GarA_2 | PM8797T_18149 | PM8797T_14721 | COG0631 Serine/threonine protein phosphatase. | COG1716 FOG: FHA domain. | 0.466 |
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