STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5167_038510OCRE domain-containing protein. (152 aa)    
Predicted Functional Partners:
C5167_012031
PRP38_assoc domain-containing protein.
   
 0.968
C5167_000472
Ubiquitin-like domain-containing protein.
    
 0.941
C5167_032956
Nop domain-containing protein.
    
 0.934
C5167_042308
Nop domain-containing protein.
    
 0.934
C5167_044452
Nop domain-containing protein.
    
 0.934
C5167_004510
J domain-containing protein.
    
 
 0.926
C5167_001856
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 0.924
C5167_015021
Sm domain-containing protein.
    
 0.923
C5167_033852
MFAP1 domain-containing protein.
   
 0.921
C5167_003255
MFAP1 domain-containing protein.
   
 0.921
Your Current Organism:
Papaver somniferum
NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.