STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5167_039059Transcriptional adapter. (623 aa)    
Predicted Functional Partners:
C5167_049159
Ubiquitinyl hydrolase 1.
    
 0.985
C5167_019014
TAF domain-containing protein.
    
 0.975
C5167_037784
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.969
C5167_012856
Uncharacterized protein.
    
 0.969
C5167_010344
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.969
C5167_004449
Uncharacterized protein.
    
 0.967
C5167_009819
Uncharacterized protein.
    
 0.967
C5167_047944
Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.
    
 0.967
C5167_012253
SAGA-associated factor 11.
    
 
 0.964
C5167_017418
Uncharacterized protein.
   
 0.954
Your Current Organism:
Papaver somniferum
NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy
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