STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5167_039189Uncharacterized protein. (495 aa)    
Predicted Functional Partners:
C5167_009043
Helicase ATP-binding domain-containing protein.
  
 
 0.897
C5167_038355
Uncharacterized protein.
  
 
 0.890
C5167_008756
Uncharacterized protein.
  
 
 0.890
C5167_006821
PRA-CH domain-containing protein.
  
 
 0.889
C5167_022225
PRA-CH domain-containing protein.
  
 
 0.889
C5167_024264
Aminotran_1_2 domain-containing protein.
  
 
 0.889
C5167_032062
Aminotran_1_2 domain-containing protein.
  
 
 0.889
C5167_023162
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase.
  
 
 0.887
C5167_000812
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase.
  
 
 0.887
C5167_020668
Imidazole glycerol phosphate synthase hisHF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The glutaminase domain produces the ammonia necessary for the cyclase domain to produce IGP and AICAR from PRFAR. The ammonia is channeled to the active site of the cyclase domain. In the C-terminal section; belongs to the HisA/HisF family.
  
 
 0.885
Your Current Organism:
Papaver somniferum
NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.