STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5167_017309Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'. (591 aa)    
Predicted Functional Partners:
C5167_040353
NnrU domain-containing protein.
  
  
 0.984
C5167_045490
Amino_oxidase domain-containing protein.
  
  
 0.977
C5167_002176
Amino_oxidase domain-containing protein.
  
  
 0.976
C5167_024094
Uncharacterized protein; Belongs to the cytochrome P450 family.
      
 0.898
C5167_032198
Uncharacterized protein; Belongs to the cytochrome P450 family.
      
 0.898
C5167_001224
Uncharacterized protein; Belongs to the cytochrome P450 family.
      
 0.896
C5167_023571
Uncharacterized protein.
  
 
 0.879
C5167_022599
Uncharacterized protein.
  
  
 0.793
C5167_031990
VDE domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.
   
  
 0.782
C5167_012898
Amino_oxidase domain-containing protein.
  
  
 0.754
Your Current Organism:
Papaver somniferum
NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy
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