STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5167_014734Uncharacterized protein. (298 aa)    
Predicted Functional Partners:
C5167_051056
Eukaryotic translation initiation factor 3 subunit L; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
    
 
 0.872
C5167_013490
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
     
 0.421
C5167_013485
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
     
 0.421
C5167_024451
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
     
 0.421
C5167_005836
U1-type domain-containing protein.
    
 
 0.408
C5167_022698
Uncharacterized protein.
    
 
 0.408
C5167_024398
Methyltransf_11 domain-containing protein.
   
  
 0.401
Your Current Organism:
Papaver somniferum
NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy
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