STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5167_025029Uncharacterized protein. (212 aa)    
Predicted Functional Partners:
C5167_013624
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.856
C5167_037163
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.705
C5167_009770
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.705
C5167_017455
Exocyst complex component SEC5; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.
    
 0.676
C5167_048421
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
  
 
 0.654
C5167_003253
Uncharacterized protein.
   
 0.646
C5167_046209
Uncharacterized protein.
   
 0.646
C5167_017127
Uncharacterized protein.
    
 0.601
C5167_015173
Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family.
   
 0.555
C5167_040719
Vacuolar protein sorting-associated protein 11 homolog; Involved in regulating membrane fusion at the tonoplast and the prevacuolar compartment.
    
 
 0.536
Your Current Organism:
Papaver somniferum
NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.