STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5167_035645GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. (267 aa)    
Predicted Functional Partners:
C5167_035180
Uncharacterized protein.
    
 
 0.952
C5167_032585
RTR1-type domain-containing protein.
    
 
 0.923
C5167_000637
RTR1-type domain-containing protein.
    
 
 0.923
C5167_046374
RTR1-type domain-containing protein.
    
 
 0.923
C5167_010106
Uncharacterized protein.
   
    0.921
C5167_004709
Uncharacterized protein.
   
 
 0.912
C5167_010081
Uncharacterized protein.
   
 
 0.912
C5167_012031
PRP38_assoc domain-containing protein.
   
    0.908
C5167_035330
GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.
  
 
0.895
C5167_018931
AAA domain-containing protein; Belongs to the GPN-loop GTPase family.
  
 
0.894
Your Current Organism:
Papaver somniferum
NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.