STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5167_002845Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprene-containing compounds such as sterols and terpenoids. Belongs to the diphosphomevalonate decarboxylase family. (449 aa)    
Predicted Functional Partners:
C5167_034827
Mevalonate kinase.
 
 
 0.995
C5167_050725
Mevalonate kinase.
 
 
 0.995
C5167_048235
Uncharacterized protein.
 
 
 0.949
C5167_015145
Nudix hydrolase domain-containing protein.
  
 
 0.934
C5167_025163
Nudix hydrolase domain-containing protein.
  
 
 0.934
C5167_004694
Uncharacterized protein.
 
 
 0.902
C5167_013156
Uncharacterized protein.
  
 
 0.853
C5167_024285
Uncharacterized protein.
  
 
 0.853
C5167_024294
Uncharacterized protein.
  
 
 0.853
C5167_009575
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
  
 0.853
Your Current Organism:
Papaver somniferum
NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy
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