STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN97349.1Polar amino acid ABC transporter ATPase. (246 aa)    
Predicted Functional Partners:
KRN97348.1
Amino acid ABC transporter, permease.
 0.999
KRN97350.1
Amino acid ABC transporter periplasmic protein; Belongs to the bacterial solute-binding protein 3 family.
 
 0.997
KRN95470.1
ABC-type amino acid transport system, permease component.
 0.994
glnM
Glutamine transport system permease.
 0.992
glnP1
Glutamine ABC transporter membrane protein.
 0.988
KRN95409.1
Polar amino acid ABC transporter inner membrane subunit.
 0.983
KRN95468.1
Glutamine ABC transporter substrate-binding protein.
 
 0.824
glnH1
Glutamine ABC transporter, substrate binding protein.
 0.781
KRN97347.1
Major facilitator superfamily permease.
       0.422
purB
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
    
 
 0.412
Your Current Organism:
Lactobacillus siliginis
NCBI taxonomy Id: 348151
Other names: DSM 22696, JCM 16155, KCTC 3985, L. siliginis, Lactobacillus siliginis Aslam et al. 2006, NBRC 101315, strain M1-212
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.