STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN96886.1HAD superfamily hydrolase. (265 aa)    
Predicted Functional Partners:
KRN93592.1
Hypothetical protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
 
 
    0.895
KRN97127.1
HAD superfamily hydrolase.
 
 
  0.818
KRN93860.1
Cof family hydrolase.
  
 
  0.804
KRN93681.1
HAD superfamily hydrolase.
  
     0.764
KRN96157.1
HAD superfamily hydrolase.
  
     0.760
KRN96887.1
Phospholipid-binding protein.
  
    0.757
KRN96943.1
Cof-like hydrolase.
  
 
  0.747
KRN97261.1
Hypothetical protein.
    
 0.596
KRN97262.1
Pyrimidine reductase, riboflavin biosynthesis.
    
 0.596
KRN95993.1
Hypothetical protein.
 
    0.552
Your Current Organism:
Lactobacillus siliginis
NCBI taxonomy Id: 348151
Other names: DSM 22696, JCM 16155, KCTC 3985, L. siliginis, Lactobacillus siliginis Aslam et al. 2006, NBRC 101315, strain M1-212
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