STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP69050.1Hypothetical protein. (109 aa)    
Predicted Functional Partners:
ABP69047.1
TIGRFAM: phage portal protein, lambda family; PFAM: phage portal protein, lambda.
 
    0.959
ABP69048.1
PFAM: peptidase U35, phage prohead HK97.
 
    0.957
ABP69049.1
Hypothetical protein.
 
     0.945
ABP69042.1
PFAM: phage terminase GpA.
 
    0.837
ABP71709.1
TIGRFAM: phage portal protein, lambda family; PFAM: phage portal protein, lambda.
 
    0.833
ABP71708.1
PFAM: peptidase U35, phage prohead HK97.
 
    0.822
ABP69046.1
Hypothetical protein.
       0.773
ABP71706.1
Hypothetical protein.
 
     0.743
ABP69041.1
Phage DNA packaging protein Nu1 subunit of terminase-like protein.
 
    0.706
ABP69051.1
PFAM: phage integrase family protein; Belongs to the 'phage' integrase family.
 
     0.594
Your Current Organism:
Rhodobacter sphaeroides ATCC 17025
NCBI taxonomy Id: 349102
Other names: R. sphaeroides ATCC 17025, Rhodobacter sphaeroides str. ATCC 17025, Rhodobacter sphaeroides strain ATCC 17025
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.