node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABP69407.1 | truA | Rsph17025_0501 | Rsph17025_0502 | PFAM: protein of unknown function DUF463, YcjX family protein. | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | 0.666 |
ABP71207.1 | ABP71208.1 | Rsph17025_2318 | Rsph17025_2319 | PFAM: ABC transporter related; SMART: AAA ATPase. | Hypothetical protein. | 0.999 |
ABP71207.1 | truA | Rsph17025_2318 | Rsph17025_0502 | PFAM: ABC transporter related; SMART: AAA ATPase. | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | 0.711 |
ABP71208.1 | ABP71207.1 | Rsph17025_2319 | Rsph17025_2318 | Hypothetical protein. | PFAM: ABC transporter related; SMART: AAA ATPase. | 0.999 |
ABP71208.1 | truA | Rsph17025_2319 | Rsph17025_0502 | Hypothetical protein. | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | 0.795 |
rplQ | rpoA | Rsph17025_2509 | Rsph17025_2510 | PFAM: ribosomal protein L17. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.993 |
rplQ | rpoC | Rsph17025_2509 | Rsph17025_2541 | PFAM: ribosomal protein L17. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.998 |
rplQ | rpsQ | Rsph17025_2509 | Rsph17025_2525 | PFAM: ribosomal protein L17. | SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.994 |
rplQ | truA | Rsph17025_2509 | Rsph17025_0502 | PFAM: ribosomal protein L17. | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | 0.920 |
rplQ | truB | Rsph17025_2509 | Rsph17025_2922 | PFAM: ribosomal protein L17. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.861 |
rpoA | rplQ | Rsph17025_2510 | Rsph17025_2509 | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | PFAM: ribosomal protein L17. | 0.993 |
rpoA | rpoC | Rsph17025_2510 | Rsph17025_2541 | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
rpoA | rpsQ | Rsph17025_2510 | Rsph17025_2525 | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.993 |
rpoA | rsmA | Rsph17025_2510 | Rsph17025_1116 | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.560 |
rpoA | truA | Rsph17025_2510 | Rsph17025_0502 | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | 0.939 |
rpoA | truB | Rsph17025_2510 | Rsph17025_2922 | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.720 |
rpoC | rplQ | Rsph17025_2541 | Rsph17025_2509 | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | PFAM: ribosomal protein L17. | 0.998 |
rpoC | rpoA | Rsph17025_2541 | Rsph17025_2510 | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
rpoC | rpsQ | Rsph17025_2541 | Rsph17025_2525 | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.998 |
rpoC | rsmA | Rsph17025_2541 | Rsph17025_1116 | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.677 |